Andre publikasjoner
Publications
Articles in refereed international scientific journals
1. Johannesson, C.-F., Nordén, J., Lange, H., Silvennoinen, H. & Larsen, K.S. Optimizing the closure period for improved accuracy of chamber-based greenhouse gas flux estimates. Agricultural and Forest Meteorology 359: 110289.
2. Asplund, J., Nordén, J., Kjønaas, O.J., Madsen, R.L., Lunde, L.F., Birkemoe, T., Ronold, E.K., Norkute, M., Jansson, K.U., Karlsen, D., Sverdrup-Thygeson, A., Skrede, I., Methlie, I.S.H., Maurice, S., Botten, U.G., Krok, R.J., Kauserud, H. & Nybakken, L. 2024. Long term effects of forest management on forest structure and dead wood in mature boreal forests. Forest Ecology and Management 572: 122315.
3. Abrego, N., Furneaux, B., Hardwick, B., Somervuo, P., Palorinne, I., Aguilar, C., Andrew, N.R., Babiy, U.V., Bao, T., Bazzano, G., Bondarchuk, S.N., Bonebrake, T.C., Brennan, G.L., Bret-Harte, S., Bässler, C., Cagnolo, L., Cameron, E.K., Chapurlat, E., Creer, S., D’Acqui, L.P., de Vere, N., Desprez-Loustau, M.-L., Dongmo, M.A.K., Dyrholm Jacobsen, I.B., Fisher, B.L., Flores de Jesus, M., Gilbert, G.S., Griffith, G.W., Gritsuk, A.A., Gross, A., Grudd, H., Halme, P., Hanna, R., Hansen, J., Holst Hansen, L., Hegbe, A.D.M.T., Hill, S., Hogg, I.D., Hultman, J., Hyde, K.D., Hynson, N.A., Ivanova, N., Karisto, P., Kerdraon, D., Knorre, A., Krisai-Greilhuber, I., Kurhinen, J., Kuzmina, M., Lecomte, N., Lecomte, E., Loaiza, V., Lundin, E., Meier, A., Mešic, A., Miettinen, O., Monkhause, N., Mortimer, P., Müller, J., Nilsson, R.H., Nonti, P.Y.C., Nordén, J., Nordén, B., Norros, V., Paz, C., Pellikka,P., Pereira, D., Petch, G., Pitkänen, J.-M., Popa, F., Potter, C., Purhonen, J., Pätsi, S., Rafiq, A., Raharinjanahary, D., Rakos, N., Rathnayaka, A.R., Raundrup, K., Rebriev, Y.A., Rikkinen, J., Rogers, H.M.K., Rogovsky, A., Rozhkov, Y., Runnel, K., Saarto, A., Savchenko, A., Schlegel, M., Schmidt, N.M., Seibold, S., Skjøth, C., Stengel, E., Sutyrina, S.V., Syvänperä, I., Tedersoo, L., Timm, J., Tipton, L., Toju, H., Uscka-Perzanowska, M., van der Bank, M., van der Bank, F.H., Vandenbrink, B., Ventura, S., Vignisson, S.R., Wang, X., Weisser, W., Wijesinghe, S.N., Wright, S.J., Yang, Y., Yorou, N.S., Young, A., Yu, D.W., Zakharov, E.W., Hebert, P.D.N., Roslin, T. & Ovaskainen, O. 2024. Airborne DNA metabarcoding reveals that fungi follow predictable spatial and seasonal dynamics at the global scale. Nature 631: 835-842.
4. Ovaskainen, O., Abrego, N., Furneaux, B., Hardwick, B., Somervuo, P., Palorinne, I., Andrew, N.R., Babiy, U.V., Bao, T., Bazzano, G., Bondarchuk, S.N., Bonebrake, T.C., Brennan, G.L., Bret-Harte, S., Bässler, C., Cagnolo, L., Cameron, E.K., Chapurlat, E., Creer, S., D’Acqui, L.P., de Vere, N., Desprez-Loustau, M.L., Dongmo, M.A.K., Dyrholm Jacobsen, I.B., Fisher, B.L., Flores de Jesus, M., Gilbert, G.S., Griffith, G.W., Gritsuk, A.A., Gross, A., Grudd, H., Halme, P., Hanna, R., Hansen, J., Holst Hansen, L., Hegbe, A.D.M.T., Hill, S., Hogg, I.D., Hultman, J., Hyde, K.D., Hynson, N.A., Ivanova, N., Karisto, P., Kerdraon, D., Knorre, A., Krisai-Greilhuber, I., Kurhinen, J., Kuzmina, M., Lecomte, N., Lecomte, E., Loaiza, V., Lundin, E., Meire, A., Mešic, A., Miettinen, O., Monkhause, N., Mortimer, P., Müller, J., Nilsson, R.H., Nonti, P.Y.C., Nordén, J., Nordén, B., Paz, C., Pellikka, P., Pereira, D., Petch, G., Pitkänen, J.-M., Popa, F., Potter, C., Purhonen, J., Pätsi, S., Rafiq, A., Raharinjanahary, D., Rakos, N., Rathnayaka, A.R., Raundrup, K., Rebriev, Y.A., Rikkinen, J., Rogers, H.M.K., Rogovsky, A., Rozhkov, Y., Runnel, K., Saarto, A., Savchenko, A., Schlegel, M., Schmidt, N.M., Seibold, S., Skjøth, C., Stengel, E., Sutyrina, S.V., Syvänperä, I., Tedersoo, L., Timm, J., Tipton, L., Toju, H., Uscka-Perzanowska, M., van der Bank, M., van der Bank, F.H., Vandenbrink, B., Ventura, S., Vignisson, S.R., Wang, X., Weisser, W.W., Wijesinghe, S.N., Wright, S.J., Yang, C., Yorou, N.S., Young, A., Yu, D.W., Zakharov, E.V., Hebert P.D.N. & Roslin, T. 2024. Global Spore Sampling Project: A global, standardized dataset of airborne fungal DNA. Scientific Data 11: 561.
5. Bässler, C., Heilmann-Clausen, J., Andrew, C., Boddy, L., Büntgen, U., Diez, J., Egli, S., Gange, A., Halvorsen, R., Heegaard, E., Kauserud, H., Kirk, P., Krisai-Greilhuber, I., Kuyper, T., Nordén, J., Senn-Irlet, B., Krah, F.S. 2022. European mushroom assemblages are phylogenetically structured by temperature. Ecography 22: e06206.
6. Moor, H., Eggers, J., Fabritius, H., Forsell, N., Henckel, L., Bradter, U., Mazziotta, A., Nordén, J. & Snäll, T. 2022. Rebuilding green infrastructure in boreal production forest given future global wood demand. Journal of Applied Ecology 59: 1559-1569.
7. Leitão, P.J., Toraño Caicoya, A., Dahlkamp, A., Guderjan, L., Griesser, M., Haverkamp, P.J., Nordén, J., Snäll, T. & Schröder, B. 2022. Impacts of forest management on forest bird occurrence patterns - a case study in Central Europe. Frontiers in Forests and Global Change 5: 786556.
8. Sønstebø, J.H., Trucchi, E., Nordén, J., Skrede, I., Miettinen, O., Pangilinan, J., Haridas, S., Grigoriev, I., Martin, F., Kauserud, H. & Maurice, S. 2022. Population genomics of a forest fungus reveals high gene flow and climate adaptation signatures. Molecular Ecology 31: 1963-1979.
9. Rusch, G.M., Bartlett, J.N., Kyrkjeeide, M.O., Lein, U., Nordén, J., Sandvik, H. & Stokland, H. 2022. A joint climate and nature cure: A transformative change perspective. Ambio 51: 1459-1473.
10. Spirin, V., Malysheva, V., Schoutteten, N., Viner, I., Miettinen, O., Nordén, J., Ryvarden, L., Kotiranta, H., Verbeken, A., Weiß, M. & Larsson, K.-H. 2021. Studies in the Basidiodendron caesiocinereum complex (Auriculariales, Basidiomycota). Mycological Progress 20: 1275-1296.
11. Maurice, S., Gontran, A., Nordén, J., Smebye Botnen, S., Miettinen, O. & Kauserud, H. 2021. Fungal sporocarps house diverse and host-specific communities of fungicolous fungi. The ISME Journal 15: 1445-1457.
12. Moor, H., Nordén, J., Penttilä, R., Siitonen, J. & Snäll, T. 2021. Long-term effects of colonization-extinction dynamics of generalist versus specialist wood-decaying fungi. Journal of Ecology 109: 491-503.
13. Põlme, S., Abarenkov, K., Nilsson, R.H., Lindahl, B.D., Clemmensen, K., Kauserud, H., Nguyen, N., Kjøller, R., Bates, S.T., Baldrian, P., Guldberg Frøslev, T., Adojaan, K., Vizzini, A., Suija, A., Pister, D., Baral, H.-O., Järv, H., Madrid, H., Nordén, J., [107 authors], Kõljalg, U. & Tedersoo, L. 2020. FungalTraits: a user-friendly traits database of fungi and fungus-like Stramenopiles. Fungal Diversity 105: 1-16.
14. Nordén, J., Harrison, P., Mair, L., Siitonen, J., Lundström, A., Kindvall, O. & Snäll, T. 2020. Occupancy versus colonisation-extinction models for projecting population trends at different spatial scales. Ecology and Evolution 10: 3079-3089.
15. Nordén, J. , Abrego, N., Boddy, L., Bässler, C., Dahlberg, A., Halme, P., Hällfors, M.H., Maurice, S., Menkis, A., Miettinen, O., Mäkipää, R., Ovaskainen, O., Penttilä, R., Saine, S., Snäll, T. & Junninen, K. 2020. Ten principles for conservation translocations of threatened wood-inhabiting fungi. Fungal Ecology 100919.
16. Krah, F.S., Büntgen, U., Schaefer, H., Müller, J., Andrew, C., Boddy, L., Diez, J., Egli, S., Freckleton, R.P., Gange, A., Halvorsen, R., Heegaard, E., Heideroth, A., Heibl, C., Heilmann-Clausen, J., Høiland, K., Kar, R., Kauserud, H., Kirk, P., Kuyper, T., Krisai-Greilhuber, I., Nordén, J., Papastefanou, P., Senn-Irlet, B. & Bässler, C. 2019. European mushroom assemblages are darker in cold climates. Nature Communications 10: 2890.
17. Ranius, T., Snäll, T. & Nordén, J. 2019. Importance of spatial configuration of deadwood habitats in species conservation. Conservation Biology 33: 1205-1207.
18. Dawson, S., Boddy, L., Halbwachs, H., Bässler, C., Andrew, C., Crowther, T., Heilmann-Clausen, J., Nordén, J., Ovaskainen, O. & Jönsson, M. 2019. Handbook for the measurement of macrofungal functional traits; a start with basidiomycete wood fungi. Functional Ecology 33: 372-387.
19. Spirin, V., Malysheva, V., Trichies, G., Savchenko, A., Põldmaa, K., Nordén, J., Miettinen, O. & Larsson, K.-H. 2018. A preliminary overview of the corticioid Atractiellomycetes (Pucciniomycotina, Basidiomycetes). Fungal Systematics and Evolution 2:311-340
20. Nordén, J., Åström, J., Josefsson, T., Blumentrath, S., Ovaskainen, O., Sverdrup-Thygeson, A., Nordén, B. 2018. At which spatial and temporal scales can fungi indicate habitat connectivity? Ecological Indicators 91: 138-148.
21. Andrew, C.J., Heegaard, E., Kirk, P.M., Heilmann-Clausen, J., Krisai-Greilhuber, I., Kuyper, T.W., Senn-Irlet, B., Büntgen, U., Diez, J.M., Egli, S., Gange, A.C., Halvorsen, R., Høiland, K., Nordén, J., Rustøen, F., Boddy, L., Kauserud, H. 2017. Big data integration: Pan-European fungal species observations' assembly for addressing contemporary questions in ecology and global change biology. Fungal Biology Reviews 31: 88-98.
22. Mair, L., Harrison, P.J., Jönsson, M., Löbel, S., Nordén, J., Siitonen, J., Lämås, T., Lundström, A. & Snäll, T. 2017. Evaluating citizen science data for forecasting species responses to national forest management. Ecology and Evolution 7: 368-378.
23. Abrego, N., Oivanen, P., Viner, I., Nordén, J., Penttilä, R., Dahlberg, A., Heilmann-Clausen, J., Somervuo, P., Ovaskainen, O. & Schigel, D. 2016. Reintroduction of threatened fungal species via inoculation. Biological Conservation 203: 120-124.
24. Rämä, T., Davey, M.L., Nordén, J., Halvorsen, R., Blaalid, R., Mathiassen, G., Alsos, I.G. & Kauserud, H. 2016. Fungi sailing the Arctic Ocean: Speciose communities in North Atlantic driftwood as revealed by high-throughput amplicon sequencing. Microbial Ecology 72: 295-304.
25. Spirin, V., Nordén, J., Svantesson, S. & Larsson, K.-H. 2016. New records of intrahymenial heterobasidiomycetes (Basidiomycota) in north Europe. Nordic Journal of Botany 34: 475-477.
26. Norros, V., Karhu, E., Nordén, J., Vähätalo, A.V. & Ovaskainen, O. 2015. Spore sensitivity to sunlight and freezing can restrict dispersal in wood decay fungi. Ecology and Evolution 5: 3312-3326.
27. Heilmann-Clausen, J., Barron, E.S., Boddy, L., Dahlberg, A., Griffith, G.W., Nordén, J., Ovaskainen, O., Perini, C., Senn-Irlet, B. & Halme, P. 2015. A fungal perspective on conservation biology. Conservation Biology 29: 61-68.
28. Ottosson, E., Nordén, J., Dahlberg, A., Edman, M., Jönsson, M., Larsson, K.-H., Olsson, J., Penttilä, R., Stenlid, J. & Ovaskainen, O. 2014. Species associations during the succession of wood-inhabiting fungal communities. Fungal Ecology 11: 17-28.
29. Rämä, T., Nordén, J., Davey, M., Mathiassen, G.H., Spatafora, J.W. & Kauserud, H. 2014. Fungi ahoy! Diversity on marine wooden substrates in the high North. Fungal Ecology 8: 46-58.
30. Ovaskainen, O., Schigel, D., Ali-Kovero, H., Auvinen, P., Paulin, L., Nordén, B. & Nordén, J. 2013. Combining high-throughput sequencing with fruit body surveys reveals contrasting life-history strategies in fungi. The ISME Journal 7: 1696-1709.
31. Nordén, J., Penttilä, R., Siitonen, J., Tomppo, E. & Ovaskainen, O. 2013. Specialist species of wood-inhabiting fungi struggle while generalists thrive in fragmented boreal forests. Journal of Ecology 101: 701-712.
32. Kauserud, H., Heegaard, E., Büntgen, U., Halvorsen, R., Egli, S., Senn-Irlet, B., Krisai-Greilhuber, I., Dämon, W., Nordén, J., Høiland, K., Kirk, P.M., Semenov, M., Stenseth, N.C. & Boddy, L. 2013. Reply to Gange et al.: Climate-driven changes in the fungal fruiting season in the United Kingdom. PNAS 110: E335.
33. Kauserud, H., Heegaard, E., Büntgen, U., Halvorsen, R., Egli, S., Senn-Irlet, B., Greilhuber, I., Dämon, W., Sparks, T., Nordén, J., Høiland, K., Kirk, P., Semenov, M., Boddy, L. & Stenseth, N.C. 2012. Warming-induced shift in European mushroom fruiting phenology. PNAS 109: 14488-14493.
34. Kauserud, H., Kumar, S., Brysting, A.K., Nordén, J. & Carlsen, T. 2012. High consistency between replicate 454 pyrosequencing analyses of ectomycorrhizal plant root samples. Mycorrhiza 22: 309-315.
35. Berglund, H., Hottola, J., Penttilä, R. & Siitonen, J. 2011. Linking substrate and habitat requirements of wood-inhabiting fungi to their regional extinction vulnerability. Ecography 34: 864-875.
36. Ovaskainen, O., Hottola, J. & Siitonen, J. 2010. Modeling species co-occurrence by multivariate logistic regression generates new hypotheses on fungal interactions. Ecology 91: 2514-2521.
37. Ovaskainen, O., Nokso-Koivisto, J., Hottola, J., Rajala, T., Pennanen, T., Ali-Kovero, H., Miettinen, O., Oinonen, P., Auvinen, P., Paulin, L., Larsson, K.-H. & Mäkipää, R. 2010. Identifying wood-inhabiting fungi with 454 sequencing - what is the probability that BLAST gives the correct species? Fungal Ecology 3: 274-283.
38. Wallenius, T., Niskanen, L., Virtanen, T., Hottola, J., Brumelis, G., Angervuori, A., Julkunen, J. & Pihlström, M. 2010. Loss of habitats, naturalness and species diversity in Eurasian forest landscapes. Ecological Indicators 10: 1093-1101.
39. Hottola, J., Ovaskainen, O. & Hanski, I. 2009. A unified measure of the number, volume and diversity of dead trees and the response of fungal communities. Journal of Ecology 97: 1320-1328.
40. Rahagalala, P., Viljanen, H., Hottola, J. & Hanski, I. 2009. Assemblages of dung beetles using introduced cattle dung in Madagascar. African Entomology 17: 71-89.
41. Halme, P., Kotiaho, J., Ylisirniö, A.-L., Hottola, J., Junninen, J., Kouki, J., Lindgren, M., Mönkkönen, M., Penttilä, R., Renvall, P., Siitonen, J. & Similä, M. 2008. Perennial polypores as indicators of annual and red-listed polypores. Ecological Indicators 9: 256-266.
42. Hottola, J. & Siitonen, J. 2008. Significance of woodland key habitats for polypore diversity and red-listed species in boreal forests. Biodiversity and Conservation 17: 2559-2577.
43. Siitonen, J., Hottola, J. & Immonen, A. 2008. Differences in stand characteristics between brook-side key habitats and managed forests in southern Finland. Silva Fennica 43: 21-37.
44. Cabeza, M., Hottola, J., Meyke, E. & Penna, M.A.H. 2005. Extending the benefits of attending a conference abroad. Conservation Biology 19: 1683.
Other research-related publications
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Kausrud, K.L., Vandvik, V., Flø, D., Geange, S.R., Hegland, S.J., Hermansen, J.S., Hole, L. R., Ims, R.A., Kauserud, H., Kirkendall, L.R., Nordén, J., Nybakken, L., Ohlson, M., Skarpaas, O., de Boer, H., Eldegard, K., Hindar, K., Järnegren, J., Måren, I.E., Nielsen, A., Nilsen, E.B., Rueness, E.K., Thorstad, E. B. & Velle, G. 2022. Impacts of climate change on the forest ecosystem. VKM Report 2022:15.
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Olsen, S.L., Bartlett, J., Davey, M., Fossøy, F., Linnell, J.D.C., Nordén, J., Odden, J., Sandercock, B.K. & Thorsen, N.H. 2021. Surveying and monitoring biodiversity using new technology: eDNA and camera trapping. NINA Report 1962. Norwegian Institute for Nature Research. (In Norwegian with an English summary)
Bartlett, J., Rusch, G.M., Kyrkjeeide, M.O., Sandvik, H. & Nordén, J. 2020. Carbon storage in Norwegian ecosystems. NINA Report 1774. Norwegian Institute for Nature Research.
Kyrkjeeide, M.O., Bartlett, J., Rusch, G.M., Sandvik, H. & Nordén, J. 2020. Karbonlagring i norske økosystemer. NINA Temahefte 76. Norsk institutt for naturforskning.
Magnussen, K., Handberg, Ø.N., Bakkestuen, V., Rød, M., Rusch, G., Nordén, J. & Rosvold, J. 2020. Kartlegging av støtteordninger med negative konsekvenser for naturmangfold. Menon-publikasjon 3/2020. MENON Economics, Oslo. 96 s.
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Sandvik, H., Evju, M., van der Meeren, G. I., Arneberg, P., Brandrud, T. E., Gjershaug, J. O., Hesthagen, T., Järnegren, J., Moy, F., Naustvoll, L.-J., Nordén, J., Rusch, G., Sandlund, O. T., Ødegaard, F. 2018. Egenskapsbank for arter. Anbefalinger til innhold og struktur for en egenskapsliste. NINA Rapport 1514. Norsk Institutt for Naturforskning.
Hottola, J. & Siitonen, J. 2006. Puronvarsien metsälakikohteiden kääpälajisto Etelä-Suomessa. In: Jalonen, R., Hanski, I., Kuuluvainen, T., Nikinmaa, E., Raitio, R., Tahvonen, O., Pelkonen, P. & Puttonen, P. 2006. Uusi metsäkirja. Gaudeamus, Helsinki, pp. 206-207.
Siitonen, J., Hottola, J. & Lommi, S. 2006. Säästöpuuston merkitys vaateliaalle kääpä- ja epifyyttijäkälälajistolle. In: Horne, P., Koskela, T., Kuusinen, M., Otsamo, A. & Syrjänen, K. (Eds.). METSOn jäljillä. Etelä-Suomen metsien monimuotoisuusohjelman tutkimusraportti. Ministry of Forestry and Agriculture, Ministry of the Environment, Finnish Forest Research Institute, and Finnish Environment Institute. Vammalan Kirjapaino Oy, pages 339-341.
Siitonen, J., Hottola, J., Lommi, S. & Mattila, J. 2006. Metsälakipuronvarsien ja verrokkitalousmetsien puuston rakenne ja lajisto. In: Horne, P., Koskela, T., Kuusinen, M., Otsamo, A. & Syrjänen, K. (Eds.). METSOn jäljillä. Etelä-Suomen metsien monimuotoisuusohjelman tutkimusraportti. Ministry of Forestry and Agriculture, Ministry of the Environment, Finnish Forest Research Institute, and Finnish Environment Institute. Vammalan Kirjapaino Oy, pages 342-345.
Siitonen, J., Hottola, J., Lommi, S. & Mattila, J. 2004. Talousmetsien luonnonhoidon merkitys lajiston monimuotoisuudelle – avainbiotoopit, säästöpuusto ja seuranta. In: Otsamo, A. (Ed.). MOSSE puolimatkassa – monimuotoisuuden tutkimusohjelman (2003–2006) välitulokset. Publications of the Ministry of Forestry and Agriculture 14/2004: 124-125.
Articles popularising science
Teien, K., White, L., Nordén, J. & Jansson, U. 2022. Sikrer ny miljøstandard for skogen økologisk bærekraft? Kronikk i Nationen. 10.6.2022
Kyrkjeeide, M.O., Rusch, G., Sandvik, H., Nordén, J. & Bartlett, J. 2020. Slik kan vi hjelpe både klima og naturmangfold – samtidig. Plantepressa: blogginnlegg på forskning.no av botanikere ved Norsk institutt for naturforskning (NINA). 30.11.2020
Teien, K., Nordén, J., Jacobsen, R. & Sverdrup-Thygeson, A. 2020. Veien mot et klima- og natursmart skogbruk. Kronikk i Nationen. 16.10.2020
Nordén, J. & Olsen S. 2018. Juletreglitteret er truet av utryddelse. Plantepressa: blogginnlegg på forskning.no av botanikere ved Norsk institutt for naturforskning (NINA). 14.12.2018
Hanski, I., Hottola, J., Kuuluvainen, T., Mäkipää, R., Ovaskainen, O. & Tahvonen, O. 2007. Keskustelussa metsien kestävästä käytöstä ja suojelusta on sivuutettu olennaisia kysymyksiä. Tieteessä tapahtuu 5/2007: 41-44.
Hottola, J. 2007. Arvokkaat metsäalueet tulee säilyttää. Opinion article, Helsingin Sanomat 5.1.2007.